CATEGORY | NAME | DATABASE FOCUS | LINK | PMID |
---|---|---|---|---|
Antimicrobial peptide database | PhytAMP | Antimicrobial plant peptides | https://webs.iiitd.edu.in/raghava/satpdb/catalogs/phytamp/ | 18836196 |
Antimicrobial peptide database | DBAASP | Chemical, 3D structure and activity for experimentally evaluated antimicrobial peptides | https://dbaasp.org/ | 24888447 |
Antimicrobial peptide database | APD | Antibacterial, antifungal, antiviral and antitumor peptides | https://aps.unmc.edu/ | 14681488 |
Antimicrobial peptide database | CAMPR3 | Sequences, structures and signatures of antimicrobial peptides | http://www.camp.bicnirrh.res.in/ | 26467475 |
Antimicrobial peptide database | DRAMP | Repository of general AMPs, patented sequences and peptides in drug development | http://dramp.cpu-bioinfor.org/ | 27075512 |
Antimicrobial peptide database | AntiTbPdb | Experimentally validated anti-tubercular peptides compiled from literature | https://webs.iiitd.edu.in/raghava/antitbpdb/ | 29688365 |
Antimicrobial peptide database | AVPdb | Experimentally validated antiviral peptides | https://webs.iiitd.edu.in/raghava/satpdb/catalogs/avpdb/ | 24285301 |
Antimicrobial peptide database | ParaPep | Experimentally validated antiparasitic peptide sequences and their structures | https://webs.iiitd.edu.in/raghava/parapep/help.php | 24923818 |
Antimicrobial peptide database | DADP | Manually curated database of antimicrobial and other defense peptides from frog | http://split4.pmfst.hr/dadp/ | 22467909 |
Antimicrobial peptide database | BaAMPs | Biofilm-active antimicrobial peptides | http://www.baamps.it/ | 25760404 |
Antimicrobial peptide database | LAMP | Antimicrobial peptide with information about their antimicrobial activity and cytotoxicity | http://biotechlab.fudan.edu.cn/database/lamp/ | 23825543 |
Antimicrobial peptide database | BACTIBASE | Bacteriocins with activity against various human and animal pathogens | http://bactibase.hammamilab.org/main.php | 17941971 |
Antimicrobial peptide database | THPdb | FDA-approved peptide and protein therapeutics | https://webs.iiitd.edu.in/raghava/thpdb/keyword.php | 28759605 |
Antimicrobial peptide database | PlantAFP | Plant-origin antifungal peptides | http://bioinformatics.cimap.res.in/sharma/PlantAFP/ | 31612325 |
Antimicrobial peptide database | MimoDB | Pepository for therapeutic peptides | https://dbpedia.org/page/MimoDB | 21079566 |
Antimicrobial peptide database | YADAMP | Antimicrobial peptides from all biological sources active against bacteria. | https://webs.iiitd.edu.in/raghava/satpdb/catalogs/yadamp/ | 22325123 |
Molecule | AntibioticDB | Clinically relevent antibacterial compounds | https://antibioticdb.com/ | 29897476 |
Molecule | ChemDB | Database of small molecules and related chemoinformatics resources | http://chemdb.ics.uci.edu/ | 16174682 |
Molecule | ASDCD | Antifungal synergistic drug combination | http://asdcd.amss.ac.cn/ | 24475134 |
Molecule | DenvInD | Dengue virus inhibitors database | https://webs.iiitd.edu.in/raghava/denvind/ | 32510549 |
Drug Target | TDD | Known therapeutic protein and nucleic acid targets described in the literature | http://db.idrblab.net/ttd/ | 11752352 |
Drug Target | PfalDB | Drug target and chemical database for Plasmodium falciparum | http://indirag.org/database/3 | 25198774 |
Drug Target | Clostridium-DTDB | Rotential drug targets with their structural information from Clostridium difficile | http://clostridium.bicpu.edu.in/ | 23415847 |
Drug Target | sc-PDB | Three-dimensional structures of druggable binding sites | http://bioinfo-pharma.u-strasbg.fr/scPDB/ | 16563002 |
Gene/ Sequence | CARD | Database of resistance genes, their products and associated phenotypes | https://card.mcmaster.ca/ | 23650175 |
Gene/ Sequence | MEGARes | High-Throughput Sequencing database | https://megares.meglab.org/ | 27899569 |
Gene/ Sequence | VFDB | Database of virulence factors of bacterial pathogens | http://www.mgc.ac.cn/VFs/ | 15608208 |
Gene/ Sequence | PATRIC | Consistent annotations across all sequenced bacterial species | https://www.patricbrc.org/ | 24225323 |
Gene/ Sequence | Mustard | Antimicrobial resistance genes and AR Determinants | http://mgps.eu/Mustard/ | 30478291 |
Gene/ Sequence | BacMet | antibacterial biocide and metal resistance genes | http://bacmet.biomedicine.gu.se/ | 24304895 |
Gene/ Sequence | MARDy | Database of antifungal drug resistance mechanisms, including amino acid substitutions, tandem repeat sequences and genome ploidy | http://www.mardy.net/ | 29897419 |
Gene/ Sequence | FARME DB | Functional metagenomic antibiotic resistance (AR) gene elements | http://staff.washington.edu/jwallace/farme/ | 28077567 |
Gene/ Sequence | u-CARE | Antibiotics with reported resistance, 107 genes, transcription factors and single nucleotide polymorphism (SNPs) involved in multiple drug resistance | http://www.e-bioinformatics.net/ucare/ | 25935546 |
Gene/ Sequence | ARDB | Annotation of gene and resistance type | https://ardb.cbcb.umd.edu/ | 18832362 |